References

Achyuthan KE, GreenBurg CS (1987) Identification of a guanosine triphosphate-binding site on guinea pig liver transglutaminase. role of GTP and calcium ions in modulating activity. J Biol Chem 262:1901-1906 Arwin H (2000) Ellipsometry on thin organic layers of biological interest: characterization and applications. Thin Solid Films 377-378:48-56 Baird C L, Myszka DG (2001) Current and emerging commercial optical biosensors. J Mol Recognit 14:261-268

Bergamini CM, Signorini M, Caselli L, Melandri P (1993) Regulation of transglutaminase activity by GTP in digitonin-permeabilized Yoshida tumour cells. Biochem Mol Biol Int 30:727-732

Berman HM, Westbrook J, Feng Z, Gilliland G, Bhat TN, Weissig H, Shindyalov IN, Bourne PE

(2000) The protein data bank. Nucleic Acids Res 28:235-242 Bucknall DG, Butler SA, Higgins JS (1999) ISIS Facility Annual Report 1998-99 RAL-TR-1998-050

Burstein E, Chen WP, Chen YJ, Hartstein A (1974) Surface polarisations - propagating electromagnetic modes at interfaces. J Vac Sci Technol 11:1004-1019 Cassadio R, Polverini E, Mariani P, Spinozzi F, Carsughi F, Fontana A, Polverino de Laureto P, Matteucci G, Bergamini CM (1999) The structural basis for the regulation of tissue transglutaminase by calcium ions. Eur J Biochem 262:672-679 Cross GH, Reeves AA, Brand S, Popplewell JF, Peel LL, Swann MJ, Freeman NJ (2003) A new quantitative optical biosensor for protein characterisation. Biosensors Bioelec-tron 19:383-390

Cross GH, Reeves A, Brand S, Swann MJ, Peel LL, Freeman NJ, Lu JR (2004) The metrics of surface adsorbed small molecules on the Young's fringe dual-slab waveguide interferometer. J Phys D Appl Phys 37:74-80 Cush R, Cronin JM, Stewart WJ, Maule CH, Molloy J, Goddard NJ (1993) The resonant mirror: a novel optical biosensor for direct sensing of biomolecular interactions.

Part I: principle of operation and associated instrumentation. Biosensors Bioelectron 8:347-354

Davis TM, Wilson WD (2000) Determination of the refractive index increments of small molecules for correction of surface plasmon resonance data. Anal Biochem 284:348-353 Davis TM, Wilson WD (2001) Surface plasmon resonance biosensor analysis of RNA-small molecule interactions. Methods Enzymol 340:22-51 Di Venere A, Rossi A, De Matteis F, Rosato N, Finazzi A, Mei G (2000) Opposite effects of Ca2+ and GTP binding on tissue transglutaminase tertiary structure. J Biol Chem 275:3915-3921

Fesus L, Piacentini M, Davies PJA (1991) Apoptosis: molecular mechanisms in programmed cell death. Eur J Cell Biol 56:170-177 Flanagan MT, Pantell RH (1984) Surface plasmon. Resonance and immunosensors. Electron Lett 20:968-970

Folk JE, Finnlayson JS (1977) The e-(y-glutamyl) lysine crosslink and the catalytic activity of transglutaminases. Adv Protein Chem 31:1-133 Fox BA, Yee VC, Pedersen LC, Le Trongi I, Bishop PD (1999) Identification of the calcium binding site and a novel ytterbium site in blood coagulation factor XIII by x-ray crystallography. J Biol Chem 274:4917-4923 Fragneto-Cusani G (2001) Neutron reflectivity at the solid/liquid interface: examples of applications in biophysics J Phys Condens Matter 13:4973-4989 Freeman NJ, Peel LL, Swann MJ, Lu JR (2004a) Lysozyme adsorption studies at the silica/water interface using dual polarization interferometry. Langmuir 20:1827-1832 Freeman NJ, Peel LL, Swann MJ, Cross GH, Reeves A, Brand S, Lu JR (2004b) Real time, high-resolution studies of protein adsorption and structure at the solid-liquid interface using dual polarisation interferometry. J Phys Condens Matter 16:S2493-S2496 Frostell-Karlsson A, Remaeus A, Roos H, Andersson K, Borg P, Hamalainen M, Karlsson R (2001) Biosensor analysis of the interaction between immobilized human serum albumin and drug compounds for prediction of human serum albumin binding levels. J Med Chem 43:1986-1992

Gestwicki JE, Hsieh HV, Pitner JB (2001) Using receptor conformational change to detect low molecular weight analytes by surface plasmon resonance. Anal Chem 73:5732-5737 Greenberg CS, Birckbichler PJ, Rice RH (1991) Transglutaminases: multifunctional cross-

linking enzymes that stabilize tissues. FASEB J 5:3071-3077 Huglin MB (ed) (1972) Light Scattering from Polymer Solutions. Academic Press, NewYork Jung LS, Nelson KE, Stayton PS, Campbell CT (2000) Streptavidins on mixed biotin-

containing alkylthiolate monolayers. Langmuir 16:9421-9432 Karlsson R (1994) Real-time competitive kinetic analysis of interactions between low-molecular-weight ligands in solution and surface-immobilized receptor. Anal Biochem 221:142-151

Karlsson R, Kullman-Magnusson M, Hamalainen MD, Remaeus A, Andersson K, Borg P, Gyzander E, Deinum J (2000) Biosensor analysis of drug-target interactions: direct and competitive binding assays for investigation of interactions between thrombin and thrombin inhibitors. Anal Biochem 278:1-13 Kendrew JC, Bodo G, Dintzis HM, Parrish RG, Wyckoff H, Phillips DC (1958) A three-dimensional model of the myoglobin molecule obtained by x-ray analysis. Nature 181:662-666

Kretschmann F, Raether H (1968) Radiative decay of non-radiative surface plasmons excited by light. Z Naturforsch Teil A 23:2135-2136 Monsonego A, Friedmann I, Shasni Y, Eisenstein M, Schwartz M (1998) GTP dependent conformational changes associated with the functional switch between G document and crosslinking activities in brain-derived tissue transglutaminase. J Mol Biol 282:713-720

Mottahedeh J, Marsh R (1998) Characterization of 101-kDa transglutaminase from physarum polycephalum and identification of LAV1-2 as substrate. J Biol Chem 273:29888-29895

Muirhead H, Perutz MF (1963) Structure of haemoglobin. A three-dimensional Fourier synthesis of reduced human haemoglobin at 5.5 A resolution. Nature 199:633-638 Nakoaka H, Perez DM, Back KJ, Das T, Husain A, Misono K, Im MJ, Graham RM (1994) Gh: a GTP-binding protein with transglutaminase activity and receptor signaling function. Science 264:1593-1596

Nellen Ph M, Tiefenthaler K, Lukosz W (1988) Integrated optical input grating couplers as biochemical sensors. Sens Actuators 15:285-295 Perutz MF (1963) X-ray analysis of hemoglobin. Science 140:863-869 Peters T (1985) Serum albumin. Adv Protein Chem 37:161-245

Radford SE (2000) Protein folding: progress made and promises ahead. Trends Biochem Sci 25:611-618

Ramsay G (ed) (1998) Commercial Biosensors: Applications to Clinical, Bioprocess and

Environmental Samples. Wiley Interscience, New York Salamon Z, Cowell S, Varga E, Yamamura HI, Hruby VJ, Tollin G (2000) Plasmon resonance studies of agonist/antagonist binding to the human ¿-Opioid receptor: new structural insights into receptor-ligand interactions. Biophys J 79:2463-2474 Shuck P (1997) Surface plasmon resonance to probe the equilibrium and dynamic aspects of interactions between biological macromolecules. Annu Rev Biophys Biomol Struct 26:541-566

Siefring GE, Apostol AB, Velasco PT, Lorand L (1978) Enzymatic basis for the Ca++-induced cross-linking of membrane proteins in intact human erythrocytes. Biochemistry 17:2598-2604

Spaeth K, Brecht A, Gauglitz (1997) Studies on the biotin-avidin multilayer adsorption by spectroscopic ellipsometry. J Colloid Interface Sci 196:128-135 Su TJ, Lu JR, Thomas RK, Cui ZF, Penfold J (1998a) The conformational structure of bovine serum albumin layers adsorbed at the silica-water interface. J Phys Chem B 102:81008108

Su TJ, Lu JR, Thomas R K, Cui ZF, Penfold J (1998b) The effect of solution pH on the structure of lysozyme layers adsorbed at the silica-water interface studied by neutron reflection. Langmuir 14:438-445

Swann MJ, Peel LL, Carrington S, Freeman NJ (2004) Dual-polarization interferometry: an analytical technique to measure changes in protein structure in real time, to determine the stoichiometry of binding events, and to differentiate between specific and nonspecific interactions. Anal Biochem 329:190-198 Tiefenthaler K, Lukosz W (1989) Sensitivity of grating couplers as integrated-optical chemical sensors. J Opt Soc Am 6:209-220 Weber PC, Ohlendorf DH, Wendoloski JJ, Salemme FR (1989) Structural origins of high-

affinity. biotin binding to streptavidin. Science 243:85-88 Wen J, Arakawa T (2000) Refractive index of proteins in aqueous sodium chloride. Anal Biochem 280:327-329

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